Overview
Our lab seeks to identify genes that regulate bone density, size and shape. All of these skeletal phenotypes have been shown to be genetically regulated and to contribute to fracture susceptibility. To better understand the interaction between genes and environment in determining skeletal integrity, we use inbred strains of mice with skeletal differences as well as mice with spontaneous mutations that result in skeletal abnormalities. Our lab also studies the structure of the skull and face, and develops new spontaneous mutations in mice with craniofacial dysmorphologies. Our goal is to identify and characterize reliable genetic and physiological mouse models for human craniofacial disorders and to share these and other models for human skeletal diseases with the scientific public.
Scientific report
Mouse Models of Skeletal and Craniofacial Development and Morphology
Quantitative trait loci analyses of bone density and body composition in mice with growth hormone deficiency
Quantitative Trait Loci (QTL) analyses are powerful tool for the discovery of regulatory genes for complex traits such as body composition and skeletal phenotypes. Crosses between inbred strains of mice have provided data that are contributing to new genetic insights regarding bone and body morphology. Further, QTL analyses can be used to partition phenotypes into their regulatory pathways by using mice with altered genomes. We use the little (Ghrhrlit) mutation, a model of growth hormone and IGF-1 deficiency, which arose spontaneously on the C57BL/6J (B6) low-bone-density inbred strain background, coupled with a new congenic strain we made by introgressing the little mutation onto the high-bone-density C3H/HeJ (C3H) inbred strain background. Homozygous mice on both backgrounds, (B6-lit/lit and C3.B6-lit/lit), have undetectable circulating growth hormone (GH), low serum insulin-like growth factor 1 (IGF1), and reduced bone mineral density (BMD), femur length, and body mass compared to normal littermates. However, although C3.B6-lit/lit mice are of the same body weight and femur length as B6-lit/lit mice, C3.B6-lit/lit mice have higher BMD and female C3.B6-lit/lit mice have lower percent body fat than B6-lit/lit females, while males of the two strains do not differ in body fat mass. To explore the genetic regulation of these differences, we crossed homozygous mutant mice of the two little strains, B6-lit/lit and C3.B6-lit/lit, to produce 1,008 male and 1,062 female F2 mice, all GH/IGF-1 deficient, but segregating alleles from B6 and C3H. QTL analyses of genome-wide data from 120 polymorphic markers (nearly 211,761 genotypes) revealed 14 regulatory loci for total body BMD, 14 for femoral BMD, 15 for periosteal circumference, 14 for femur length, 8 for L2-L4 lumbar vertebral BMD, 14 for body weight, 12 for percent body fat, and 11 for serum IGF-1 with highly significant LOD scores. All nineteen chromosomes had QTL for multiple phenotypes.
Further, we have identified interactive pairs of QTL in which a particular QTL is not detected until it is paired with another QTL. For example, the QTL on Chromosome (Chr) 2 at 26cM for whole body BMD was not detected in the main effect analysis; however the interactive pair 2:18 (Chr 18 at 42cM) has a significant LOD of 5.09. Again for the whole body BMD phenotype, the QTL on Chr 15 must be paired with either the QTL on Chr 5 or 7 to have a significant effect. In contrast, the contributing QTL to the interactive pairs Chr 9:11 and 12:16 each has a significant individual effect, as well as a significant interactive effect. Similar examples can be found for other phenotypes. The importance of these interacting QTL is threefold: the proteins encoded by the genes within the QTL may interact physically, e.g., ligand and receptor; they may represent a biological pathway; or they may be part of a redundant physiological system. These possibilities can only be evaluated once the genes within the QTL are identified; this work is ongoing in my laboratory.
Mouse models of craniofacial disorders
In addition to the axial and appendicular skeleton, my laboratory studies craniofacial morphology. Our goal is to identify and characterize reliable genetic and physiological mouse models for human craniofacial dysmorphologies and to share these models with the scientific public. To date, we have identified more than one hundred deviants with heritable craniofacial abnormalities including: abnormal ear pinnae shape, size, and placement; shortened snouts; shortened, domed, and asymmetrical skulls; abnormal dentition; abnormal eye morphology; and deafness. We perform comprehensive genetic studies and preliminary characterization studies that include clinical examination, basic histology, and evaluation of bone-density and skeletal anomalies, dentition, vision, and hearing. Recently, we have identified the gene responsible for three new mutants: one with extra teeth, one with glaucoma, and one with a short lower jaw, small ears, and a sparse coat. Manuscripts describing these new mouse models and their importance to human health are in preparation. In addition, the chromosomal locations of several other new mutants have been identified. We provide both uncharacterized and completed models to the scientific community via our web site www.jax.org/cranio/ and distribute live mice upon request. We have a dedicated email address, faces@jax.org, for direct communication with interested investigators.
Mouse models of fracture susceptibility
The skeleton serves ambulatory, as well as metabolic and protective, functions. Because bone is important for mobility and muscle attachment, the ultimate test of skeletal integrity is its resistance to fracture. Although fracture often is associated with osteoporotic patients, stress fracture from constant overuse and acute fracture from trauma can occur in any population. In the human clinic, the gold standard used to predict fracture risk is bone mineral density (BMD) as measured by dual energy X-ray absorptiometry. Yet other characteristics of bone architecture including size, shape, and quality are important contributors to bone strength and should be considered when predicting fracture risk. In addition, it has been shown that these morphological phenotypes are often associated with differences in muscle mass. Coupled with this expanded interest in phenotyping of bone and muscle is an intense search for genetic predisposition for fracture based on these newly identified indices of bone strength. The interpretation of these studies has been complicated by the heterogeneity of the human population and by environmental differences. Taken together, however, the studies demonstrate that genetic regulation of bone strength is complex and that animal models are critical to progress in this field.
To determine if BMD, muscle mass, or bone morphological phenotypes are good predictors of skeletal strength in mice, we collected data on skeletal geometry, muscle mass, BMD, and bone strength from mice of nine genetically diverse inbred strains. We used three measures of bone strength: peak load (the maximum amount of stress that the femur can withstand before breaking); stiffness (the amount of stress the bone can withstand and still return to its original shape); and energy to break (a measure of the amount of energy needed to cause a fracture, often termed the toughness of bone).
We found that BMD at the mid-shaft of the femur was a significant predictor of peak load and stiffness, but was a poor predictor of energy to break. In contrast, measures of femoral geometry-femur length and dimension-were significant predictors of peak load, stiffness, and energy to break. Similarly, both the area and weight of the quadricep muscle were good predictors of all three measures of bone strength in both male and female mice, although the weight of the isolated quadricep muscle was a stronger predictor of energy to break in females than in males, and a better predictor of peak load in males than in females. These data support the hypothesis that skeletal geometry and muscle mass are important determinants of bone strength and fracture risk. In addition, we have shown that there are sex differences for some predictors of bone strength. Finally, our data demonstrate that inbred strains of mice can be used as models to discover the genetic regulation of bone geometry and strength.
Mouse models of heritable skeletal diseases
With the Mouse Mutant Resource, we continue to develop mouse models for skeletal diseases that result from spontaneous mutations in single genes. We are currently characterizing and mapping several new mutations that result in appendicular and axial skeletal malformations, craniofacial abnormalities, and both loss and abnormal accretion of bone mineral. These mutants will become important models for studying bone physiology and morphology.
Lab staff
Principal Investigator: Leah Rae Donahue, Ph.D.
Co-Principal Investigators: Wesley Beamer, Ph.D., Muriel T. Davisson, Ph.D., Stephen A. Murray, Ph.D., Clifford J. Rosen, M.D.
Research Assistant II: Michelle M. Curtain
Biomedical Technologist II: Harold Coombs III, Coleen Kane
Executive Assistant: Aimée Picard
Publication listings
Selected Publications
Donahue LR, Hrabe de Angelis M, Hagn M, Franklin C, Lloyd KCK, Magnuson T, McKerlie C, Nakagata N, Obata Y, Read S, Wurst W, Horlein A, Davisson MT. 2012. Centralized Mouse Repositories, Mammalian Genome, in press.
Xing W, Govoni KE, Donahue LR, Kesavan C, Wergedal J, Long C, Duncan Bassett JH, Gogakos A, Wojcicka A, Williams GR and Mohan S. 2012. Genetic Evidence That Thyroid Hormone Is Indispensable for Prepubertal Insulin-like Growth Factor–I Expression and Bone Acquisition in Mice. J Bone Miner Res 27(5): 1067-1979. DOI: 10.1002/jbmr.1551. PMID: 22513648Besnard V, Wert SE, Ikegami M, Xu Y, Heffner C, Murray SA, Donahue LR, Whitsett JA. 2011. Maternal synchronization of gestational length and lung maturation. PLoS One 2011; 6(11):e26682. PMID: 22096492.
Lindfors C, Nilsson IA, Garcia-Roves PM, Zuberi AR, Karimi M, Donahue LR, Roopenian DC, Mulder J, Uhlén M, Ekström TJ, Davisson MT, Hökfelt TG, Schalling M, Johansen JE. 2011. Hypothalamic mitochondrial dysfunction associated with anorexia in the anx/anx mouse. Proc Natl Acad Sci U S A. 2011 Oct 24. [Epub ahead of print] PMID: 22025706. Reinholdt LG, Ding Y, Gilbert GT, Czechanski A, Solzak JP, Roper RJ, Johnson MT, Donahue LR, Lutz C, Davisson MT. 2011. Molecular characterization of the translocation breakpoints in the Down syndrome mouse model Ts65Dn. Mamm Genome, 2011; 22(11-12):685-91. PMID: 21953412. Keane TM, Goodstadt L, Dancek P, White MA, Wong K, Yalcin B, Heger A, Agam A, Slater G, Goodson M, Furlotte NA, Eskin E, Nellaker C, Whitley H, Cleak J, Janowitz D, Hernandez-Pliego P, Edwards A, Belgard TG, Oliver, P, McIntyre RE, Bhomra A, Nicod J, Gan X, Yuan W, van der Weyden L, Steward CA, Bala S, Stalker J, Mott R, Durbin R, Jackson IJ, Czechanski A, Guerra-Assuancao JA, Donahue LR, Reinholdt LG, Payseur BA, Ponting CP, Birney W, Flint J, Adams DJ. 2011. Mouse genomic variation and its effect on phenotypes and gene regulation. Nature 477, 289-294. PMID: 21921910.Fairfield H, Gilbert GJ, Barter M, Corrigan RR, Curtain M, Ding Y, D'Ascenzo M, Gerhardt DJ, He C, Huang W, Richmond T, Rowe L, Probst FJ, Bergstrom DE, Murray SA, Bult C, Richardson J, Kile B, Gut I, Hager J, Sigurdsson S, Mauceli E, Di Palma F, Lindblad-Toh K, Cunningham ML, Cox TC, Justice MJ, Spector MS, Lowe SW, Albert T, Donahue LR, Jeddeloh J, Shendure J, Reinholdt LG. 2011. Mutation discovery in mice by whole exome sequencing. Genome Biol. 12(9):R86. PMID: 21917142. Hochheiser H, Aronow BJ, Artinger K, Beaty TH, Brinkley JF, Chai Y, Clouthier D, Cunningham ML, Dixon M, Donahue LRD, Fraser SE, Iwata J, Marazita ML, Murray JC, Murray SA, Postlethwait J, Potter S, Shapiro L, Spritz R, Visel A, Weinberg SM, Trainor PA for the Facebase Consortium. 2011. The FaceBase Consortium: A Comprehensive Program to Facilitate Craniofacial Research. Developmental Biology 355(2): 175-82. PMID: 21458441.
Pratt CH, Curtain M, Donahue LR, Shopland LS. 2011. Mitotic Defects Lead to Pervasive Aneuploidy and Accompany Loss of RB1 Activity in Mouse LmnaDhe Dermal Fibroblasts. PLoS ONE 6(3): e18065. PMCID: PMC3064591 Chase TH, Lyons BL, Bronson RT, Foreman O, Donahue LR, Burzenski LM, Gott B, Lane P, Harris B, Ceglarek U, Thiery J, Wittenburg H, Thon JN, Italiano JE Jr, Johnson KR, Shultz LD. 2010. The mouse mutation "thrombocytopenia and cardiomyopathy" (trac) disrupts Abcg5: a spontaneous single gene model for human hereditary phytosterolemia/sitosterolemia. Blood 115(6):1267-76. PMCID: PMC2826237.DeMambro V, Kawai M, Clemens T, Fulzele K, Maynard J, de Evsikova M, Johnson K, Canalis E, Beamer W, Rosen C, Donahue LR. 2010. A novel spontaneous mutation of Irs1 in mice results in hyperinsulinemia, reduced growth, low bone mass and impaired adipogenesis. J Endocrinol 204(3):241-53. PMCID: PMC3033737.
Odgren PR, Pratt CH, MacKay CA, Mason-Savas A, Curtain M, Shopland L, Ichicki T, Sundberg JP, Donahue LR. 2010. Disheveled hair and ear (Dhe), a spontaneous mouse Lmna mutation modeling human laminopathies. doi:10.1371/journal.pone.0009959. PLoS One 5(4):e9959. PMCID: PMC2848607.
Murray SA, Morgan JL, Kane C, Sharma Y, Heffner CS, Lake J, Donahue LR. 2010. Mouse gestation length is genetically determined. PLoS ONE 5(8):e12418. PMCID: PMC2928290.
Varlakhanova NV, Cotterman RF, deVries WN, Morgan J, Donahue LR, Murray S, Knowles BB, Knoepfler PS. 2010. myc maintains embryonic stem cell pluripotency and self-renewal. Differentiation 80(1):9-19. PMCID: PMC2916696.D'Ascenzo M, Meacham C, Kitzman J, Middle C, Knight J, Winer R, Kukricar M, Richmond T, Albert TJ, Czechanski A, Donahue LR, Affourtit J, Jeddeloh JA, Reinholdt L. 2009. Mutation discovery in the mouse using genetically guided array capture and resequencing. http://dx.doi.org/10.1007/s00335-009-9200-y. Mamm Genome 20(7):424-36. PMCID: PMC2829192.
Mao M, Thedens DR, Chang B, Harris BS, Zheng QY, Johnson KR, Donahue LR, Anderson MG. 2009. The podosomal-adaptor protein SH3PXD2B is essential for normal postnatal development. Mamm Genome 20(8):462-75. PMCID: PMC2759419.
Govoni KE, Donahue LR, Marden C, Mohan S. 2008. Complex genetic regulation of bone mineral density and insulin-like growth factor-I in C57BL/6J-Chr #A/J/NaJ chromosome substitution strains. Physiol Genomics 35:159-164.
Gregorova S, Divina P, Storchova R, Trachtulec Z, Fotopulosova V, Svenson KL, Donahue LR, Paigen B, Forejt J. 2008. Mouse consomic strains: Exploiting genetic divergence between Mus m. musculus and Mus m. domesticus subspecies. Genome Res 18(3):509-515.
Ishimori N, Stylianou JM, Korstanje R, Marion MA, Li R, Donahue LR, Rosen CJ, Beamer WG. Paigen B, Chruchill GA. 2008. Quantitative trait loci for BMD in an SMJ by NZB/B1NJ intercross population and identification of Trps1 as a possible candidate gene. J Bone Miner Res 23(9):1529-1537.
Li R, Svenson KL, Donahue LR, Peters LL, Churchill GA. 2008. The relationships of dietary fat, body composition and bone mineral density in inbred mouse strain panels. Physiol Genomics 33(1):26-32.
Beamer WG, Shultz KL, Ackert-Bicknell CL, Horton LG, Delahunty KM, Coombs III HF, Donahue LR, Canalis E, Rosen CJ. 2007. Genetic dissection of mouse distal chromosome 1 reveals three linked BMD QTLs with sex-dependent regulation of bone phenotypes. J Bone Miner Res 22(8):1187-1196.
Garman R, Gaudette G, Donahue LR, Rubin C, Judex S. 2007. Low-level accelerations applied in the absence of weight bearing can enhance trabecular bone formation. J Orthop Res 25:732-740.
Jiao Y, Yan J, Jiao F, Yang H, Donahue LR, Li X, Roe BA, Stuart J, Gu W. 2007. A single nucleotide mutation in Nppc is associated with long bone abnormality in lbab mice. BMC Genetics 8:16.
Johnson KR, Marden CC, Ward-Bailey P, Gagnon LH, Bronson RT, Donahue LR. 2007. Congenital hypothyroidism, dwarfism, and hearing impairment caused by a missense mutation in mouse dual oxidase 2 gene, Duox2. Mol Endocrinol 21(7):1593-1602.
Kohler T, Stauber M, Donahue LR, Muller R. 2007. Automated compartmental analysis for high-throughput skeletal phenotyping in femora of genetic mouse models. Bone 41:659-667.
Schneider P, Stauber M, Voide R, Stampanoni M, Donahue LR, Muller R. 2007. Ultrastructural properties in cortical bone vary greatly in two inbred strains of mice as assessed by synchrotron light based micro- and nano-CT. J Bone Miner Res 22(10):1557.
Yan J, Jiao Y, Jiao F, Stuart J, Donahue LR, Beamer WG, Li X, Roe BA, LeDoux MS, Gu W. 2007. Effects of carbonic anhydrase VIII deficiency on cerebellar gene expression profiles in the wdl mouse. Neurosci Lett 413:196-201.
Ishimori N, Li R, Walsh KA, Korstanje R, Rollins JA, Petkov P, Pletcher MT, Wiltshire T, Donahue LR, Rosen CJ, Beamer WG, Churchill GA, Paigen B. 2006. Quantitative trait loci that determine BMD in C57BL/6J and 129S1/SvlmJ inbred mice. J Bone Miner Res 21(1):105-112.
Xie L, Jacobson JM, Choi ES, Busa B, Donahue LR, Miller LM, Rubin CT, Judex S. 2006. Low-level mechanical vibrations can influence bone resorption and bone formation in the growing skeleton. Bone 39(5):1059-1066.